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Computational Biology, Gene Regulatory Networks, Discrete Algorithms.
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Paper and Book Chapter: Stefan Gremalschi and Gulsah Altun.
"Mean Squared Residue Based Biclustering Algorithms", 2008,
International Symposium on Bioinformatics Research and Applications, ISBRA 2008, LNBI 4983, pp. 232–243.
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Poster: Stefan Gremalschi and Alexander Zelikovsky.
"New Biclustering Algorithm", 2007 Georgia Tech-ONRL International Conference on Bioinformatics
(BINF 2007).
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Poster: Gulsah Altun, Stefan Gremalschi, Robert W. Harrison, and Alexander Zelikovsky.
"Linear Programming for Protein-Protein Interaction Prediction", 2007 Georgia Tech-ONRL International Conference on Bioinformatics
(BINF 2007).
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Poster: Stefan Gremalschi, Dumitru Brinza and Alexander Zelikovsky. (2007)
"Model Fitting Disease Susceptibility Prediction Methods", 2nd Annual Computational and Systems Biology Symposium (CSBS 2007).
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Poster: "Support Vector Machine and Clique Based Approach for Feature Selection in Protein Profiles".
Gulsah Altun, Hae-Jin Hu, Stefan Gremalschi, Robert W. Harrison, Yi Pan. RECOMB'07, accepted.
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Paper: "A Feature Selection Algorithm based on Graph Theory and Random Forests for Protein Secondary Structure Prediction".
Gulsah Altun, Hae-Jin Hu, Stefan Gremalschi, Robert W. Harrison, Yi Pan.
Accepted at ISBRA07, February 1, 2007.
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Paper: "Genotype Susceptibility and Integrated Risk Factors for Complex Disease".
Weidong Mao, Dumitru Brinza, Nisar Hundewale, Stefan Gremalschi and Alexander Zelikovsky. 2006 IEEE
International Conference on Granular Computing (GrC 2006), pp. 754-757.
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Poster: "Genetics Susceptibility Prediction to Complex Diseases".
Weidong Mao, Nisar Hundewale, Stefan Gremalschi and Alexander Zelikovsky.
The Second SECABC Fall Workshop ON Biocomputing, 2005.
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Poster-Chair on International Symposium on Bioinformatics Research and Applications (ISBRA), 2008.
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Programming Languages
Java, J2EE, Pascal/Object Pascal, C/C++, PHP, Perl, Visual Basic/ASP, Assembly.
Database
MS SQL Server, MySQL, Access, Oracle, JDBC, ODBC
Web Development
JSP, PHP, XML, CSS, DreamWeaver, (D/X)HTML, JavaScript, Flash ActionScript.
Graphical Design
Adobe Photoshop, Illustrator, InDesign.
Macromedia Flash.
Operating Systems
Win XP, 2K, 98, NT, Linux, Unix.
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"Combinatorial and Algorithmic Issues for Microarray Analysis", CSc8983.
(pdf)
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"Plaid Models", CSc8910.
(pdf)
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"Samba Algorithm", CSc8910.
(pdf)
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"Permutation Circuits", CSc8530.
(pdf)
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"Resource and Delay Efficient Matrix Multiplication using Newer FPGA Devices", CSc8215.
(pdf)
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"Random Forest: Prediction of Genetic Susceptibility to Complex Diseases", CSc6520.
(pdf)
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